The detailed information of tRNA gene sequence


Sequence ID>SRA1002572
Genome IDSRR001663.45272
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 39
End posion on genome 114
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgcagtagat
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGCAACAGGGGTTCGAAT
CCCCTACGGGATGCCG
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002572	Glu	TTC
                   t      GCCG nnnnnnnnnn
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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