The detailed information of tRNA gene sequence


Sequence ID>SRA1002573
Genome IDSRR001663.45419
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 83
End posion on genome 1
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attgttgtgc
tRNA gene sequence 
GGGAGCATGGCGGAATTGGTAGACGCAGTGCACTCAAAATGCACCGACTTCGGTCTTCTC
GGTTCAAGTCCGAGTGCTCCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002573	Leu	CAA
                   c      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T G
                    T     G A G C C     A
      T A A        G      | | | | |     A
    T       G G C G       C T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGACTTCGGTCTT
                    G - C
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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