The detailed information of tRNA gene sequence


Sequence ID>SRA1002575
Genome IDSRR001663.48693
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 10
End posion on genome 85
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ncgcgccagt
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCACAGGTTCGAAT
CCTGTACGGCTCACCA
Downstream region at tRNA end position 
ctatcacgaa
Secondary structure (Cloverleaf model)
>SRA1002575	Lys	TTT
                   t      ACCA ctatcacgaa
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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