The detailed information of tRNA gene sequence


Sequence ID>SRA1002595
Genome IDSRR001663.98720
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ntagttatat
tRNA gene sequence 
GCGCTTGTAGCTCAGTAGGATAGAGCACCAGATTCCTAATCTGGGGGTCGCAGGTTCGAT
TCCTGCCAAGCGCGCCA
Downstream region at tRNA end position 
tcaccgatta
Secondary structure (Cloverleaf model)
>SRA1002595	Arg	CCT
                   t      GCCA tcaccgatta
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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