The detailed information of tRNA gene sequence


Sequence ID>SRA1002607
Genome IDSRR001663.134883
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 110
End posion on genome 36
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnnncgac
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTAGAGCACAACCTTGCCAAGGTTAGGGTCGAGGGTTCGAATC
CCTTCACCCGCTCCA
Downstream region at tRNA end position 
atttccaagt
Secondary structure (Cloverleaf model)
>SRA1002607	Gly	GCC
                   c      TCCA atttccaagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C   A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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