The detailed information of tRNA gene sequence


Sequence ID>SRA1002613
Genome IDSRR001663.156983
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 16
End posion on genome 92
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgggtaaagc
tRNA gene sequence 
GCCCTGGTAGCTCAGGGGATAGAGACAACCCCCTCCTAAGGGGTAGGTCGGACGTTCGAT
TCGTCTCCGGGGCGCCA
Downstream region at tRNA end position 
taattaatta
Secondary structure (Cloverleaf model)
>SRA1002613	Arg	CCT
                   c      GCCA taattaatta
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T T
                    T     T C T G C     A
      G G A        A      + | | | |     G
    G       C T C G       G G A C G     C
    G         +   |                 T T
    A       A G A C
      T A G        A     AGGTC
                    A - T
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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