The detailed information of tRNA gene sequence


Sequence ID>SRA1002619
Genome IDSRR001663.168633
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 27
End posion on genome 100
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tggcccgtga
tRNA gene sequence 
GGGGCTGTAGCTCAGCCGGATAGAGCGACGGTTTCCTAAACCGTAGGTCGTGGGTTCGAG
TCCCGCCAGCCCCGttg
Downstream region at tRNA end position 
tttaagactc
Secondary structure (Cloverleaf model)
>SRA1002619	Arg	CCT
                   a      Gttg tttaagactc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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