The detailed information of tRNA gene sequence


Sequence ID>SRA1002624
Genome IDSRR001663.178941
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 104
End posion on genome 20
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnncga
tRNA gene sequence 
AGGGAGTTTCCCGAGCGGTCAAAGGGGTCAGACTGTAAATCTGATGGCAGTGCCTTCACA
GGTTCGAATCCTGTACTCCCCACTA
Downstream region at tRNA end position 
cataaatgga
Secondary structure (Cloverleaf model)
>SRA1002624	Tyr	GTA
                   a      ACTA cataaatgga
                     A   C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        T      | | | | |     G
    G       G C C C       A C A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        G     TGGCAGTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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