The detailed information of tRNA gene sequence


Sequence ID>SRA1002628
Genome IDSRR001663.191105
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 83
End posion on genome 9
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgttataagt
tRNA gene sequence 
GCCCGGGTAGCTCAGGGGTAGAGCAGTGGACTGAAAATCCTCGTGTCGGTGGTTCAAATC
CGCCCCCGGGCACCA
Downstream region at tRNA end position 
tctttcaann
Secondary structure (Cloverleaf model)
>SRA1002628	Phe	GAA
                   t      ACCA tctttcaann
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
        G A        A      | | + | |     A
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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