The detailed information of tRNA gene sequence


Sequence ID>SRA1002629
Genome IDSRR001663.198819
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 23
End posion on genome 108
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cttcaaattt
tRNA gene sequence 
GGAGGGGTGGTCGAGTGGTTAAAGGCAGCGGACTGTAAATCCGCCCGCGTGAGCGTACGT
AGGTTCGAATCCTACCCCCTCCACCA
Downstream region at tRNA end position 
taattggaga
Secondary structure (Cloverleaf model)
>SRA1002629	Tyr	GTA
                   t      ACCA taattggaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T A G G     C
    G         | + |                 T T
    T       A G G C
      T A A        A     CCGCGTGAGCGTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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