The detailed information of tRNA gene sequence


Sequence ID>W1810120329
Genome IDPHSN01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidimangrovimonas sediminis MS2-2 [PHSN]
Start position on genome 75785
End posion on genome 75696
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctaggcaagc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGGGTTTGCGCCCA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttgccttag
Secondary structure (Cloverleaf model)
>W1810120329	Ser	CGA
                   c      GCCA cttgccttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTTTGCGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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