The detailed information of tRNA gene sequence


Sequence ID>SRA1002646
Genome IDSRR001663.241778
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 94
End posion on genome 20
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gcgccaatgc
tRNA gene sequence 
TGGGATGTAGCCAAGTGGTAAGGCAACTGTTTTTGGTACAGTGTACCGTAGGTTCGAATC
CTACCATCCCAGCCA
Downstream region at tRNA end position 
ttacccacat
Secondary structure (Cloverleaf model)
>SRA1002646	Gln	TTG
                   c      GCCA ttacccacat
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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