The detailed information of tRNA gene sequence


Sequence ID>SRA1002650
Genome IDSRR001663.275504
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gcgccactgC
tRNA gene sequence 
TGGGATGTAGCCAAGTGGTAAGGCAACTGTTTTTGGTACAGTGTACCGTAGGTTCGAATC
CTACCATCCCAGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002650	Gln	TTG
                   C      GCnn nnnnnnnnnn
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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