The detailed information of tRNA gene sequence


Sequence ID>SRA1002665
Genome IDSRR001663.323711
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 95
End posion on genome 24
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tcacgtccat
tRNA gene sequence 
GCGGGTGTAATTCAGCGGTAGAATGTCAGCTTCCCAAGCTGGACGTCGCCGGTTCGAATC
CGGTCACCCGCTtgg
Downstream region at tRNA end position 
tcaagatctt
Secondary structure (Cloverleaf model)
>SRA1002665	Gly	CCC
                   t      Ttgg tcaagatctt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G G C C     A
        G A        A      + | | | |     G
      C     C T T A       G C C G G     C
      G     | | | |                 T T
      G     G A A T
        T A        G     ACGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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