The detailed information of tRNA gene sequence


Sequence ID>SRA1002666
Genome IDSRR001663.325535
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 33
End posion on genome 110
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aaaaaaatta
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGTACTTGGCTTCGAACCAAAGGGGTCGGGAGTTCGA
ATCTTCCCGGGCGCGCCA
Downstream region at tRNA end position 
attaaaaaat
Secondary structure (Cloverleaf model)
>SRA1002666	Arg	TCG
                   a      GCCA attaaaaaat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C T T C     A
      C G A        A      | | + | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGGTC
                    C   A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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