The detailed information of tRNA gene sequence


Sequence ID>SRA1002668
Genome IDSRR001663.328618
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 101
End posion on genome 26
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agttcagccT
tRNA gene sequence 
GGGACCGTAGTTCAATCGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAA
TCCCGTCGGTCCCGTtt
Downstream region at tRNA end position 
tcattccccc
Secondary structure (Cloverleaf model)
>SRA1002668	Asp	GTC
                   T      GTtt tcattccccc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T A A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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