The detailed information of tRNA gene sequence


Sequence ID>SRA1002674
Genome IDSRR001663.344526
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 29
End posion on genome 101
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaatttgtt
tRNA gene sequence 
GCCGATGTAGCTCAGCTGGTAGAGCAACGCTTTCGTAAAGCGTGGGTCGCCTGTTCAAGT
CAGGTCATCGGCTttg
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002674	Thr	CGT
                   t      Tttg nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G G A C     A
      C G A        A      + | | | |     A
    T       C T C G       G C C T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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