The detailed information of tRNA gene sequence


Sequence ID>SRA1002679
Genome IDSRR001663.358620
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 76
End posion on genome -1
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gagaccttgT
tRNA gene sequence 
GGCTCCTTAGCTCAACTGGATAGAGCAGCCGACTTCTAATCGGCTAGGTTGAGGGTTCGA
GTCCTTCAGGGGCCGNNn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002679	Arg	TCT
                   T      GNNn nnnnnnnnnn
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TAGGTT
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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