The detailed information of tRNA gene sequence


Sequence ID>SRA1002682
Genome IDSRR001663.364981
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 102
End posion on genome 27
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cggattacaT
tRNA gene sequence 
GGAGTCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAAG
TCCCGTCGACTTCGTga
Downstream region at tRNA end position 
gcgaaagctc
Secondary structure (Cloverleaf model)
>SRA1002682	Asp	GTC
                   T      GTga gcgaaagctc
                     G - C
                     G + T
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK