The detailed information of tRNA gene sequence


Sequence ID>SRA1002690
Genome IDSRR001667.11622
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 79
End posion on genome 3
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcttggat
tRNA gene sequence 
GGCGGGATAGCTCAGCTGGTTAGAGCGTCGGATTCATAATCCGGAGGTCGAGGGATCGTG
GCCCCCTCCCGCTACAA
Downstream region at tRNA end position 
gannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002690	Met	CAT
                   t      ACAA gannnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          G G
                    T     C C C C C     T
      C G A        A      |   | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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