The detailed information of tRNA gene sequence


Sequence ID>SRA1002692
Genome IDSRR001667.16065
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 22
End posion on genome 111
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcagttatgc
tRNA gene sequence 
GGAGCGGTACTCAAGTGGCTGAAGAGGACGGTTTGCTAAATCGTTAGACGGGTCTCCCGT
GCGGGGGTTCGAATCCCCCCCGCTCCGCCA
Downstream region at tRNA end position 
ggtaaataca
Secondary structure (Cloverleaf model)
>SRA1002692	Ser	GCT
                   c      GCCA ggtaaataca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G G G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGACGGGTCTCCCGTGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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