The detailed information of tRNA gene sequence


Sequence ID>SRA1002703
Genome IDSRR001668.1381
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 2
End posion on genome 77
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACTA
Downstream region at tRNA end position 
aagataagaa
Secondary structure (Cloverleaf model)
>SRA1002703	Met	CAT
                   t      ACTA aagataagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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