The detailed information of tRNA gene sequence


Sequence ID>SRA1002710
Genome IDSRR001668.12692
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 89
End posion on genome 16
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccagctatct
tRNA gene sequence 
GGTTCATTAGCCAAGTGGTAAGGCAATGGTCTGCAAAACCATGATCGCAGGTTCGATTCC
TGCATGGGCCTCAA
Downstream region at tRNA end position 
taaaaaaaat
Secondary structure (Cloverleaf model)
>SRA1002710	Cys	GCA
                   t      TCAA taaaaaaaat
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     A - T
                     T - A          T T
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     A C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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