The detailed information of tRNA gene sequence


Sequence ID>SRA1002711
Genome IDSRR001668.13363
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 95
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtttgtttc
tRNA gene sequence 
GGACTTGTAGCTCAGTTTGGTTTAGAGCAACAGACTCATAATCTGGAGGTCCCTGGTTCA
AGCCCAGGCTGGTCCACtt
Downstream region at tRNA end position 
tcaaaatcag
Secondary structure (Cloverleaf model)
>SRA1002711	Met	CAT
                   c      ACtt tcaaaatcag
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T   T
                     G - C          C G
                    T     G G A C C     A
    T T G A        A      | | | | |     A
  T         C T C G       C C T G G     C
  G         | | | |                 T T
  G         G A G C
    T T T A        A     AGGTC
                    A   G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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