The detailed information of tRNA gene sequence


Sequence ID>SRA1002715
Genome IDSRR001668.18270
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 94
End posion on genome 20
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagttgtttc
tRNA gene sequence 
GGACTTGTAGCTCAGTTGGTTAGAGCAACAGACTCATAATCTGGAGGTCCCTGGTTCAAG
CCCAGGCTGGTCCACtt
Downstream region at tRNA end position 
tcaaaatcaa
Secondary structure (Cloverleaf model)
>SRA1002715	Met	CAT
                   c      ACtt tcaaaatcaa
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T   T
                     G - C          C G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A   G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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