The detailed information of tRNA gene sequence


Sequence ID>SRA1002717
Genome IDSRR001668.21454
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 31
End posion on genome 119
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctcgttttt
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTAAACCCCTAAAGGGT
TTCGCGGGTTCGAATCCCGCTCTCTCCGCtt
Downstream region at tRNA end position 
taagnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002717	Ser	GGA
                   t      GCtt taagnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TAAACCCCTAAAGGGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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