The detailed information of tRNA gene sequence


Sequence ID>SRA1002730
Genome IDSRR001669.12634
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 102
End posion on genome 29
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnncttaat
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAAGGGTTCGAAT
CCCTTTATCTCCACtg
Downstream region at tRNA end position 
tgagtgaatt
Secondary structure (Cloverleaf model)
>SRA1002730	Ala	TGC
                   t      ACtg tgagtgaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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