The detailed information of tRNA gene sequence


Sequence ID>SRA1002750
Genome IDSRR001670.12170
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 99
End posion on genome 28
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttctacacaa
tRNA gene sequence 
GGTGTCTTAACCGAGCGGTTAGGTAACGGTCTGCAAAACCGTGTAGAGCGGTTCGACTCC
GCTAGACACCTCat
Downstream region at tRNA end position 
aaaaaggaag
Secondary structure (Cloverleaf model)
>SRA1002750	Cys	GCA
                   a      TCat aaaaaggaag
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A          T C
                    T     T C G C C     A
        G A        A      | | | | |     G
      C     G C C A       A G C G G     C
      G       | | |                 T T
      G     A G G T
        T T        A     GTAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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