The detailed information of tRNA gene sequence


Sequence ID>SRA1002805
Genome IDSRR002326.30234
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 199
End posion on genome 109
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgtccgat
tRNA gene sequence 
GGAGAGGTACCCAAGTGGCTGAAGGGGACGGTTTGCTAAATCGTTAGAGGGTGAAAGCCC
TGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aactaaaaag
Secondary structure (Cloverleaf model)
>SRA1002805	Ser	GCT
                   t      GCCA aactaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGAGGGTGAAAGCCCTGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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