The detailed information of tRNA gene sequence


Sequence ID>SRA1002830
Genome IDSRR002326.44205
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 214
End posion on genome 125
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtttttcct
tRNA gene sequence 
GGAGATGTGGCCGAGCGGTTTAAGGCTGCAGTCTTGAAAACTGCCGAGGGGGTAACCCCT
CCGTGAGTTCGAATCTCACCGTCTCCACCA
Downstream region at tRNA end position 
gttcacaaat
Secondary structure (Cloverleaf model)
>SRA1002830	Ser	TGA
                   t      ACCA gttcacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        T     CGAGGGGGTAACCCCTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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