The detailed information of tRNA gene sequence


Sequence ID>SRA1002834
Genome IDSRR002326.46698
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 145
End posion on genome 69
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttggcctgta
tRNA gene sequence 
GGTGATATAGCTCAGTTGGTTAGAGCGCAGCATTCATAATGCTGATGTCGGTGGTTCAAG
TCCACCTATCACCACCA
Downstream region at tRNA end position 
cggattttca
Secondary structure (Cloverleaf model)
>SRA1002834	Met	CAT
                   a      ACCA cggattttca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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