The detailed information of tRNA gene sequence


Sequence ID>SRA1002837
Genome IDSRR002326.50256
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 88
End posion on genome 180
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacggttaac
tRNA gene sequence 
GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATACGGTGATGAGCT
GTATCAAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
agcgccctgt
Secondary structure (Cloverleaf model)
>SRA1002837	Ser	GCT
                   c      GCCA agcgccctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       A A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATACGGTGATGAGCTGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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