The detailed information of tRNA gene sequence


Sequence ID>SRA1002845
Genome IDSRR002326.55311
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 104
End posion on genome 15
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgcaaagac
tRNA gene sequence 
GGAAGGGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCCTGCAAGGGTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
aagcgggcgt
Secondary structure (Cloverleaf model)
>SRA1002845	Ser	TGA
                   c      GCCA aagcgggcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGCCTGCAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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