The detailed information of tRNA gene sequence


Sequence ID>SRA1002850
Genome IDSRR002326.58051
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 74
End posion on genome 150
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccttacccaa
tRNA gene sequence 
GGCCCCGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCGAG
CCCGGTCGGGTCGCTCA
Downstream region at tRNA end position 
ttcgtgcccg
Secondary structure (Cloverleaf model)
>SRA1002850	Asp	GTC
                   a      CTCA ttcgtgcccg
                     G   G
                     G - C
                     C   T
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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