The detailed information of tRNA gene sequence


Sequence ID>SRA1002852
Genome IDSRR002326.59338
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 241
End posion on genome 150
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttattaac
tRNA gene sequence 
GGAAGGTTGGCTCGAGATGGATTATGGCTCTAGTCTTGAAAACTAGCGGGGTGTAAAAGC
TTCCAAGGGTTCGAATCCCTTACCTTCCTCCA
Downstream region at tRNA end position 
ttttatagga
Secondary structure (Cloverleaf model)
>SRA1002852	Ser	TGA
                   c      TCCA ttttatagga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T T C C C     A
    A G A G        G      | | | | |     G
  T         C T C G       A A G G G     C
  G           + | |                 T T
  G         T G G C
    A T T A        T     CGGGGTGTAAAAGCTTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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