The detailed information of tRNA gene sequence


Sequence ID>SRA1002867
Genome IDSRR002326.66264
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 89
End posion on genome 15
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tacgtctttt
tRNA gene sequence 
GGGGCCGTAGTGATAATGGTAGCACATGTGCTTTGCAAGCATGAGGTAAGGGTTCGATTC
CCTTCGGCTCCGCCA
Downstream region at tRNA end position 
ccatttttcc
Secondary structure (Cloverleaf model)
>SRA1002867	Ala	TGC
                   t      GCCA ccatttttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T T C C C     A
      A A T        A      | | | | |     G
    T       A G T G       A A G G G     C
    G         | | |                 T T
    G       G C A C
      T A          A     AGGT
                    T + G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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