The detailed information of tRNA gene sequence


Sequence ID>SRA1002874
Genome IDSRR002326.68806
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 143
End posion on genome 218
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctagcgcccg
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTAGAGCGCTTCCTTTACACGGAAGATGTCGGCGGTTCGAGC
CCGTCATCGCCCACCA
Downstream region at tRNA end position 
ggcgcctttt
Secondary structure (Cloverleaf model)
>SRA1002874	Val	TAC
                   g      ACCA ggcgcctttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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