The detailed information of tRNA gene sequence


Sequence ID>SRA1002880
Genome IDSRR002326.71752
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 188
End posion on genome 262
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cccgcgcctg
tRNA gene sequence 
CTCGCCGTAGTTCAATGGACAGAACGGCCGCCTCCTAAGCGGCAGATACAGGTTCGATTC
CTGTCGGCGGGACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002880	Arg	CCT
                   g      ACCA nnnnnnnnnn
                     C - G
                     T + G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | |                 T T
    A       G A A C
      C A          G     AGAT
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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