The detailed information of tRNA gene sequence


Sequence ID>SRA1002909
Genome IDSRR002326.94955
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 183
End posion on genome 259
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tataaaaatt
tRNA gene sequence 
GGGGGATTAGCTCATTTGGCTAGAGCGCTTCGCTGGCAGTGAAGAGGTGATCGGTTCGAA
TCCGATATTCTCCACAA
Downstream region at tRNA end position 
attaaaagct
Secondary structure (Cloverleaf model)
>SRA1002909	Ala	GGC
                   t      ACAA attaaaagct
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T T A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    C - G
                    T - A
                    T - A
                    C - G
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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