The detailed information of tRNA gene sequence


Sequence ID>SRA1002930
Genome IDSRR002326.106876
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 160
End posion on genome 234
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gtagaggcgG
tRNA gene sequence 
GCTGATGTAGCTCAGTTGGTAGAGCGCGTCCTTGGGTAAGACGAGGTCACCGGTTCAATT
CCGGTCATCAGCTTnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002930	Pro	GGG
                   G      TTnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C   A
                  T       A
                  T       T
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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