The detailed information of tRNA gene sequence


Sequence ID>SRA1002933
Genome IDSRR002326.108139
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 247
End posion on genome 172
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position
ttacgaattc
tRNA gene sequence
GGCCAAGTAGCTCAGTCGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCCTTGGCCACCA
Downstream region at tRNA end position
cttccccgtg
Secondary structure (Cloverleaf model)
>SRA1002933	Phe	GAA
                   c      ACCA cttccccgtg
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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