The detailed information of tRNA gene sequence


Sequence ID>SRA1002943
Genome IDSRR002326.114261
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 77
End posion on genome 1
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtctggttc
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGAGTGTTCAAG
TCACTCACGCCCTACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002943	Met	CAT
                   c      ACCA nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C T C A C     A
      T G A        A      | | | | |     A
    T       C T C G       G A G T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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