The detailed information of tRNA gene sequence


Sequence ID>SRA1002952
Genome IDSRR002326.119463
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 131
End posion on genome 42
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaattgata
tRNA gene sequence 
GGAGAGATGACTGAGAGGCCGAAAGTAGCCGTTTGCTAAACTGCCGTACCCTTTATCCGG
TACCGAGGGTTCGAATCCCTCTCTCTCCACag
Downstream region at tRNA end position 
attaccttcg
Secondary structure (Cloverleaf model)
>SRA1002952	Ser	GCT
                   a      ACag attaccttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    C       A A G T
      C G A        A     CGTACCCTTTATCCGGTACC
                    G - C
                    C - G
                    C   T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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