The detailed information of tRNA gene sequence


Sequence ID>SRA1002979
Genome IDSRR002326.132558
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 175
End posion on genome 88
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaattgca
tRNA gene sequence 
GGAGGCTTGGGGGAGTGGTTTAACCCAACAGTCTTGAAAACTGTCGACGGGAAACCGTCC
GTGAGTTCGAATCTCACAGCCTCCGCCA
Downstream region at tRNA end position 
gcaagccagc
Secondary structure (Cloverleaf model)
>SRA1002979	Ser	TGA
                   a      GCCA gcaagccagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G G G G       G T G A G     C
    G         | | |                 T T
    T       A C C C
      T T A        A     CGACGGGAAACCGTCC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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