The detailed information of tRNA gene sequence


Sequence ID>SRA1002981
Genome IDSRR002326.132904
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 13
End posion on genome 86
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcattcaac
tRNA gene sequence 
ACGGGAATAGTTCAACGGTAGAATGCGGGTCTCCAACACCCTTGATCAGGGTTCGAATCC
TTGTTCCCGTGCAA
Downstream region at tRNA end position 
gttaattaag
Secondary structure (Cloverleaf model)
>SRA1002981	Trp	CCA
                   c      GCAA gttaattaag
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T T C C     A
        A A        A      | | + | |     G
      C     C T T G       C A G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        G     TGAT
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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