The detailed information of tRNA gene sequence


Sequence ID>SRA1002982
Genome IDSRR002326.134516
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 33
End posion on genome 109
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaacgaaaaa
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
attcatgagc
Secondary structure (Cloverleaf model)
>SRA1002982	Pro	CGG
                   a      ACCA attcatgagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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