The detailed information of tRNA gene sequence


Sequence ID>SRA1002987
Genome IDSRR002326.139256
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 74
End posion on genome 163
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atttatttgc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCTTAGTGCACCGGTCTCGAAAATCGGAGTGCCGGAAACGGCA
CCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttattgaatt
Secondary structure (Cloverleaf model)
>SRA1002987	Ser	CGA
                   c      GCCA ttattgaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        A     AGTGCCGGAAACGGCACC
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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