The detailed information of tRNA gene sequence


Sequence ID>SRA1002988
Genome IDSRR002326.139913
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 272
End posion on genome 196
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcaaaaaaa
tRNA gene sequence 
GGTCCTATAGCTCATTCGGTTAGAGCAACTGACTCATAATCAGTAGGTGCTTGGTTCGAT
TCCAAGTGGGACCACAA
Downstream region at tRNA end position 
attaagtaaa
Secondary structure (Cloverleaf model)
>SRA1002988	Met	CAT
                   a      ACAA attaagtaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G A A C C     A
      T T A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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