The detailed information of tRNA gene sequence


Sequence ID>W1810157765
Genome IDPJCD01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella sp. ALD9 [PJCD]
Start position on genome 1039316
End posion on genome 1039405
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcacaaatt
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACGAGAGTTCGAATCTCTCGCTCACCGCCA
Downstream region at tRNA end position 
tattatgaaa
Secondary structure (Cloverleaf model)
>W1810157765	Ser	GGA
                   t      GCCA tattatgaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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