The detailed information of tRNA gene sequence


Sequence ID>SRA1003023
Genome IDSRR002326.159002
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 43
End posion on genome 116
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttggagcag
tRNA gene sequence 
GGCTGGGTAGCTCAGCTGGTTAGAGCACGGCACTCATAATGCCGGGGTCGCGGGTTCGAG
TCCCGCCCCAGCTAttt
Downstream region at tRNA end position 
tgtaagtcga
Secondary structure (Cloverleaf model)
>SRA1003023	Met	CAT
                   g      Attt tgtaagtcga
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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